SubtiBank SubtiBank
yczH [2020-04-08 17:05:34]
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yczH [2020-04-08 17:05:34]

unknown
locus
BSU_04020
pI
8.89
mw
20.93 kDa
protein length
202 aa Sequence Blast
gene length
609 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    454,652 455,260

    The protein

    Protein family

  • dienelactone hydrolase family (with [protein|19B1345F36B2320F0714B8EF1B939C65FA7E382D|YtaP], according to UniProt)

    • Structure

  • [PDB|1ZI6] (Carboxymethylenebutenolidase from Pseudomonas putida, corresponds to aa 3 ... 123, 23.9%)

    • Expression and Regulation

    Operons

    genes
    [gene|025BB89AF2AAAC5BCF780A7FE0E23042E85BB743|yczH]
    description
    [pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-C070 (yczH::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2068 NBRP B. subtilis, Japan]
  • BKE04020 ([gene|025BB89AF2AAAC5BCF780A7FE0E23042E85BB743|yczH]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE04020 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAACGGCCTCCTTTTGTG, downstream forward: _UP4_TAAACGTGCACGGCGCTTTA
  • BKK04020 ([gene|025BB89AF2AAAC5BCF780A7FE0E23042E85BB743|yczH]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK04020 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAACGGCCTCCTTTTGTG, downstream forward: _UP4_TAAACGTGCACGGCGCTTTA